Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.33■□□□□ 0.36
CNGA1P29973 AC016700.1-201ENST00000429424 312 ntBASIC17.33■□□□□ 0.36
CNGA1P29973 Z97180.1-201ENST00000445173 988 ntBASIC17.33■□□□□ 0.36
CNGA1P29973 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.33■□□□□ 0.36
CNGA1P29973 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.33■□□□□ 0.36
CNGA1P29973 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.33■□□□□ 0.36
CNGA1P29973 PPY2P-201ENST00000582808 702 ntBASIC17.33■□□□□ 0.36
CNGA1P29973 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.33■□□□□ 0.36
CNGA1P29973 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CNGA1P29973 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.33■□□□□ 0.36
CNGA1P29973 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.33■□□□□ 0.36
CNGA1P29973 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CNGA1P29973 AC091812.3-201ENST00000621362 345 ntBASIC17.33■□□□□ 0.36
CNGA1P29973 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.33■□□□□ 0.36
CNGA1P29973 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.33■□□□□ 0.36
CNGA1P29973 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
CNGA1P29973 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
CNGA1P29973 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNGA1P29973 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CNGA1P29973 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 CICP13-201ENST00000422015 2789 ntBASIC17.32■□□□□ 0.36
CNGA1P29973 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.32■□□□□ 0.36
CNGA1P29973 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 AC091046.1-201ENST00000331871 207 ntBASIC17.32■□□□□ 0.36
CNGA1P29973 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.32■□□□□ 0.36
CNGA1P29973 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.32■□□□□ 0.36
CNGA1P29973 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.32■□□□□ 0.36
CNGA1P29973 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 SPTLC1P5-201ENST00000450718 252 ntBASIC17.32■□□□□ 0.36
CNGA1P29973 RN7SL11P-201ENST00000471305 293 ntBASIC17.32■□□□□ 0.36
CNGA1P29973 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 SERPINA13P-202ENST00000478994 924 ntBASIC17.32■□□□□ 0.36
CNGA1P29973 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 RN7SL720P-201ENST00000488178 304 ntBASIC17.32■□□□□ 0.36
CNGA1P29973 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.32■□□□□ 0.36
CNGA1P29973 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
CNGA1P29973 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNGA1P29973 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.32■□□□□ 0.36
CNGA1P29973 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CNGA1P29973 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA1P29973 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.32■□□□□ 0.36
CNGA1P29973 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
CNGA1P29973 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 AC132872.4-202ENST00000622924 2756 ntBASIC17.31■□□□□ 0.36
CNGA1P29973 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.31■□□□□ 0.36
CNGA1P29973 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.31■□□□□ 0.36
CNGA1P29973 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CNGA1P29973 MIR4722-201ENST00000578292 60 ntBASIC17.31■□□□□ 0.36
CNGA1P29973 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 AC091544.8-201ENST00000619490 361 ntBASIC17.31■□□□□ 0.36
CNGA1P29973 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.31■□□□□ 0.36
CNGA1P29973 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNGA1P29973 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.31■□□□□ 0.36
CNGA1P29973 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 AC068587.6-202ENST00000641839 5619 ntBASIC17.31■□□□□ 0.36
CNGA1P29973 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNGA1P29973 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA1P29973 AL136379.1-201ENST00000623471 2642 ntBASIC17.31■□□□□ 0.36
CNGA1P29973 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms