Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AP003392.6-201ENST00000607709 325 ntBASIC16.79■□□□□ 0.28
CTGFP29279 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.79■□□□□ 0.28
CTGFP29279 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.79■□□□□ 0.28
CTGFP29279 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CTGFP29279 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CTGFP29279 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
CTGFP29279 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.78■□□□□ 0.28
CTGFP29279 HLA-DMA-203ENST00000395305 777 ntBASIC16.78■□□□□ 0.28
CTGFP29279 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.78■□□□□ 0.28
CTGFP29279 AC093909.3-201ENST00000504783 336 ntBASIC16.78■□□□□ 0.28
CTGFP29279 GCOM2-201ENST00000509133 1104 ntBASIC16.78■□□□□ 0.28
CTGFP29279 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.78■□□□□ 0.28
CTGFP29279 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.78■□□□□ 0.28
CTGFP29279 RN7SL470P-201ENST00000583069 259 ntBASIC16.78■□□□□ 0.28
CTGFP29279 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.78■□□□□ 0.28
CTGFP29279 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.78■□□□□ 0.28
CTGFP29279 AC012508.2-201ENST00000567613 1472 ntBASIC16.78■□□□□ 0.28
CTGFP29279 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTGFP29279 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTGFP29279 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTGFP29279 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.78■□□□□ 0.28
CTGFP29279 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTGFP29279 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.77■□□□□ 0.28
CTGFP29279 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CTGFP29279 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.77■□□□□ 0.28
CTGFP29279 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.77■□□□□ 0.28
CTGFP29279 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.77■□□□□ 0.28
CTGFP29279 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.77■□□□□ 0.28
CTGFP29279 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.77■□□□□ 0.28
CTGFP29279 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.77■□□□□ 0.28
CTGFP29279 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.77■□□□□ 0.28
CTGFP29279 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.77■□□□□ 0.28
CTGFP29279 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CTGFP29279 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.77■□□□□ 0.28
CTGFP29279 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.77■□□□□ 0.28
CTGFP29279 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.77■□□□□ 0.28
CTGFP29279 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.77■□□□□ 0.28
CTGFP29279 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.77■□□□□ 0.28
CTGFP29279 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 AC011247.3-201ENST00000603297 438 ntBASIC16.77■□□□□ 0.28
CTGFP29279 AP001527.2-201ENST00000614441 631 ntBASIC16.77■□□□□ 0.28
CTGFP29279 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
CTGFP29279 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTGFP29279 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.77■□□□□ 0.28
CTGFP29279 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CTGFP29279 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CTGFP29279 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.77■□□□□ 0.27
CTGFP29279 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.77■□□□□ 0.27
CTGFP29279 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTGFP29279 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTGFP29279 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.77■□□□□ 0.27
CTGFP29279 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.77■□□□□ 0.27
CTGFP29279 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.77■□□□□ 0.27
CTGFP29279 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTGFP29279 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTGFP29279 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.77■□□□□ 0.27
CTGFP29279 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
CTGFP29279 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CTGFP29279 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CTGFP29279 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.76■□□□□ 0.27
CTGFP29279 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.76■□□□□ 0.27
CTGFP29279 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTGFP29279 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTGFP29279 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.76■□□□□ 0.27
CTGFP29279 OR2R1P-201ENST00000441404 914 ntBASIC16.76■□□□□ 0.27
CTGFP29279 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.76■□□□□ 0.27
CTGFP29279 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.76■□□□□ 0.27
CTGFP29279 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.76■□□□□ 0.27
CTGFP29279 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms