Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 MEP1AP4-201ENST00000423244 1087 ntBASIC13.1□□□□□ -0.31
CCL1P22362 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 VDAC1P7-201ENST00000462417 847 ntBASIC13.1□□□□□ -0.31
CCL1P22362 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.1□□□□□ -0.31
CCL1P22362 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL1P22362 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.1□□□□□ -0.31
CCL1P22362 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
CCL1P22362 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL1P22362 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.1□□□□□ -0.31
CCL1P22362 DUX4L47-201ENST00000566374 394 ntBASIC13.1□□□□□ -0.31
CCL1P22362 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL1P22362 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL1P22362 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CCL1P22362 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CCL1P22362 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CCL1P22362 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL1P22362 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL1P22362 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 INTS4P1-203ENST00000641008 3683 ntBASIC13.09□□□□□ -0.31
CCL1P22362 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CCL1P22362 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CCL1P22362 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.09□□□□□ -0.31
CCL1P22362 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.09□□□□□ -0.31
CCL1P22362 METTL21AP1-201ENST00000438852 635 ntBASIC13.09□□□□□ -0.31
CCL1P22362 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 AC023310.3-201ENST00000557027 670 ntBASIC13.09□□□□□ -0.31
CCL1P22362 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 AC100756.1-201ENST00000562736 682 ntBASIC13.09□□□□□ -0.31
CCL1P22362 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.09□□□□□ -0.31
CCL1P22362 AC138749.3-201ENST00000567691 622 ntBASIC13.09□□□□□ -0.31
CCL1P22362 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.09□□□□□ -0.31
CCL1P22362 AC116165.1-201ENST00000611806 668 ntBASIC13.09□□□□□ -0.31
CCL1P22362 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL1P22362 FLJ16779-201ENST00000612722 7638 ntBASIC13.09□□□□□ -0.31
CCL1P22362 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL1P22362 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms