Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.95□□□□□ -0.18
CD53P19397 AC004790.1-201ENST00000612686 536 ntBASIC13.95□□□□□ -0.18
CD53P19397 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.95□□□□□ -0.18
CD53P19397 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.95□□□□□ -0.18
CD53P19397 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.95□□□□□ -0.18
CD53P19397 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.95□□□□□ -0.18
CD53P19397 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.95□□□□□ -0.18
CD53P19397 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.95□□□□□ -0.18
CD53P19397 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CD53P19397 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD53P19397 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.95□□□□□ -0.18
CD53P19397 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.95□□□□□ -0.18
CD53P19397 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD53P19397 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.94□□□□□ -0.18
CD53P19397 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CD53P19397 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 KRT17P8-201ENST00000540749 863 ntBASIC13.94□□□□□ -0.18
CD53P19397 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CD53P19397 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CD53P19397 AC044860.1-202ENST00000559481 777 ntBASIC13.94□□□□□ -0.18
CD53P19397 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 RAB43P1-201ENST00000561790 589 ntBASIC13.94□□□□□ -0.18
CD53P19397 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.94□□□□□ -0.18
CD53P19397 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.94□□□□□ -0.18
CD53P19397 AC007431.3-201ENST00000623221 587 ntBASIC13.94□□□□□ -0.18
CD53P19397 AC018892.3-201ENST00000623986 2499 ntBASIC13.94□□□□□ -0.18
CD53P19397 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD53P19397 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.94□□□□□ -0.18
CD53P19397 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CD53P19397 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD53P19397 MYO15B-237ENST00000642007 4893 ntBASIC13.93□□□□□ -0.18
CD53P19397 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD53P19397 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.93□□□□□ -0.18
CD53P19397 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD53P19397 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.93□□□□□ -0.18
CD53P19397 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 MIR658-201ENST00000385210 100 ntBASIC13.93□□□□□ -0.18
CD53P19397 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.93□□□□□ -0.18
CD53P19397 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD53P19397 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.93□□□□□ -0.18
CD53P19397 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.93□□□□□ -0.18
CD53P19397 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CD53P19397 AL450472.2-201ENST00000603663 1156 ntBASIC13.93□□□□□ -0.18
CD53P19397 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms