Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AC254562.1-201ENST00000417586 456 ntBASIC14.86□□□□□ -0.03
LINGO3P0C6S8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 SPTSSB-204ENST00000617024 1292 ntBASIC14.86□□□□□ -0.03
LINGO3P0C6S8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINGO3P0C6S8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AP001267.2-201ENST00000532619 2086 ntBASIC14.85□□□□□ -0.03
LINGO3P0C6S8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 HAUS4P1-201ENST00000406739 1145 ntBASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AC245100.5-201ENST00000452108 331 ntBASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AC093520.2-201ENST00000561830 333 ntBASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 MIR4321-201ENST00000592276 80 ntBASIC14.85□□□□□ -0.03
LINGO3P0C6S8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.85□□□□□ -0.03
LINGO3P0C6S8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms