Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC007950.2-201ENST00000615045 2347 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC6P09630 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC6P09630 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
HOXC6P09630 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HOXC6P09630 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.03■□□□□ 0.32
HOXC6P09630 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 AC012441.2-201ENST00000444843 739 ntBASIC17.03■□□□□ 0.32
HOXC6P09630 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 AC104784.1-201ENST00000473096 294 ntBASIC17.03■□□□□ 0.32
HOXC6P09630 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC6P09630 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC6P09630 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 IQSEC3P1-201ENST00000538799 536 ntBASIC17.03■□□□□ 0.32
HOXC6P09630 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC6P09630 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 RN7SL555P-201ENST00000584742 339 ntBASIC17.03■□□□□ 0.32
HOXC6P09630 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 AC132192.2-201ENST00000596206 1147 ntBASIC17.03■□□□□ 0.32
HOXC6P09630 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
HOXC6P09630 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC6P09630 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXC6P09630 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC6P09630 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC6P09630 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXC6P09630 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HOXC6P09630 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 AC011840.2-201ENST00000563063 1520 ntBASIC17.02■□□□□ 0.32
HOXC6P09630 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC6P09630 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 RN7SKP230-201ENST00000365642 335 ntBASIC17.02■□□□□ 0.32
HOXC6P09630 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HOXC6P09630 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.02■□□□□ 0.32
HOXC6P09630 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXC6P09630 RCC2P8-201ENST00000502779 1035 ntBASIC17.02■□□□□ 0.32
HOXC6P09630 RTN3P1-201ENST00000536295 711 ntBASIC17.02■□□□□ 0.32
HOXC6P09630 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXC6P09630 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXC6P09630 AC073352.2-201ENST00000609385 439 ntBASIC17.02■□□□□ 0.32
HOXC6P09630 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC6P09630 AC103691.2-201ENST00000618824 433 ntBASIC17.02■□□□□ 0.32
HOXC6P09630 NAP1L6-202ENST00000641404 1222 ntBASIC17.02■□□□□ 0.32
HOXC6P09630 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC6P09630 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC6P09630 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
HOXC6P09630 CICP13-201ENST00000422015 2789 ntBASIC17.02■□□□□ 0.31
HOXC6P09630 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC6P09630 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC6P09630 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC6P09630 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC6P09630 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.02■□□□□ 0.31
HOXC6P09630 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC6P09630 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms