Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.8■□□□□ 0.12
CD48P09326 AL096865.1-201ENST00000606796 927 ntBASIC15.8■□□□□ 0.12
CD48P09326 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.8■□□□□ 0.12
CD48P09326 AC008761.3-201ENST00000624803 892 ntBASIC15.8■□□□□ 0.12
CD48P09326 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CD48P09326 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CD48P09326 AC026748.1-201ENST00000624349 3251 ntBASIC15.8■□□□□ 0.12
CD48P09326 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.8■□□□□ 0.12
CD48P09326 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CD48P09326 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 INTS4P1-203ENST00000641008 3683 ntBASIC15.8■□□□□ 0.12
CD48P09326 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.8■□□□□ 0.12
CD48P09326 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.8■□□□□ 0.12
CD48P09326 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 AC097359.2-201ENST00000604992 2389 ntBASIC15.79■□□□□ 0.12
CD48P09326 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CD48P09326 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CD48P09326 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CD48P09326 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.79■□□□□ 0.12
CD48P09326 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CD48P09326 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.79■□□□□ 0.12
CD48P09326 AC002472.2-201ENST00000442739 958 ntBASIC15.79■□□□□ 0.12
CD48P09326 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.79■□□□□ 0.12
CD48P09326 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.79■□□□□ 0.12
CD48P09326 AC093813.1-201ENST00000605066 256 ntBASIC15.79■□□□□ 0.12
CD48P09326 AC004233.3-201ENST00000607794 1269 ntBASIC15.79■□□□□ 0.12
CD48P09326 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.79■□□□□ 0.12
CD48P09326 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CD48P09326 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.79■□□□□ 0.12
CD48P09326 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD48P09326 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD48P09326 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CD48P09326 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 C1QBPP1-201ENST00000400117 770 ntBASIC15.78■□□□□ 0.12
CD48P09326 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.78■□□□□ 0.12
CD48P09326 RPL13AP25-201ENST00000484130 612 ntBASIC15.78■□□□□ 0.12
CD48P09326 ELK1P1-201ENST00000485699 580 ntBASIC15.78■□□□□ 0.12
CD48P09326 AC104596.2-201ENST00000512793 793 ntBASIC15.78■□□□□ 0.12
CD48P09326 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.78■□□□□ 0.12
CD48P09326 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.78■□□□□ 0.12
CD48P09326 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 AC007431.3-201ENST00000623221 587 ntBASIC15.78■□□□□ 0.12
CD48P09326 AC023090.2-201ENST00000625182 2110 ntBASIC15.78■□□□□ 0.12
CD48P09326 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms