Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 AC018442.1-201ENST00000421439 2061 ntBASIC14.08□□□□□ -0.16
THBS1P07996 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
THBS1P07996 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.08□□□□□ -0.16
THBS1P07996 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
THBS1P07996 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.07□□□□□ -0.16
THBS1P07996 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.07□□□□□ -0.16
THBS1P07996 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.07□□□□□ -0.16
THBS1P07996 MTND4LP12-201ENST00000448237 295 ntBASIC14.07□□□□□ -0.16
THBS1P07996 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.07□□□□□ -0.16
THBS1P07996 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 RN7SL399P-201ENST00000471648 279 ntBASIC14.07□□□□□ -0.16
THBS1P07996 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.07□□□□□ -0.16
THBS1P07996 DOC2GP-202ENST00000514950 1163 ntBASIC14.07□□□□□ -0.16
THBS1P07996 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.07□□□□□ -0.16
THBS1P07996 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.07□□□□□ -0.16
THBS1P07996 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.07□□□□□ -0.16
THBS1P07996 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.07□□□□□ -0.16
THBS1P07996 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 AL049840.4-201ENST00000602422 811 ntBASIC14.07□□□□□ -0.16
THBS1P07996 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.07□□□□□ -0.16
THBS1P07996 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.07□□□□□ -0.16
THBS1P07996 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.07□□□□□ -0.16
THBS1P07996 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.07□□□□□ -0.16
THBS1P07996 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.07□□□□□ -0.16
THBS1P07996 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 AC063926.2-201ENST00000623766 1308 ntBASIC14.07□□□□□ -0.16
THBS1P07996 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THBS1P07996 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.07□□□□□ -0.16
THBS1P07996 AL138799.1-201ENST00000448213 1675 ntBASIC14.07□□□□□ -0.16
THBS1P07996 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
THBS1P07996 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.07□□□□□ -0.16
THBS1P07996 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.06□□□□□ -0.16
THBS1P07996 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
THBS1P07996 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.06□□□□□ -0.16
THBS1P07996 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 NUS1P3-201ENST00000423502 862 ntBASIC14.06□□□□□ -0.16
THBS1P07996 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
THBS1P07996 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.06□□□□□ -0.16
THBS1P07996 TPRX2P-201ENST00000535362 881 ntBASIC14.06□□□□□ -0.16
THBS1P07996 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.06□□□□□ -0.16
THBS1P07996 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.06□□□□□ -0.16
THBS1P07996 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
THBS1P07996 AC010326.4-201ENST00000604665 891 ntBASIC14.06□□□□□ -0.16
THBS1P07996 AC093813.1-201ENST00000605066 256 ntBASIC14.06□□□□□ -0.16
THBS1P07996 AC012645.4-201ENST00000610691 1061 ntBASIC14.06□□□□□ -0.16
THBS1P07996 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.06□□□□□ -0.16
THBS1P07996 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.06□□□□□ -0.16
THBS1P07996 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
THBS1P07996 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THBS1P07996 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms