Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC6.6□□□□□ -1.35
USH2AO75445 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 IFNL3P1-201ENST00000595082 501 ntBASIC6.6□□□□□ -1.35
USH2AO75445 AC245369.7-201ENST00000631386 350 ntBASIC6.6□□□□□ -1.35
USH2AO75445 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
USH2AO75445 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
USH2AO75445 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC6.6□□□□□ -1.35
USH2AO75445 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 AC005865.2-202ENST00000635814 725 ntBASIC6.6□□□□□ -1.35
USH2AO75445 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
USH2AO75445 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC6.6□□□□□ -1.35
USH2AO75445 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC6.6□□□□□ -1.35
USH2AO75445 SEPHS2P1-201ENST00000511618 1162 ntBASIC6.6□□□□□ -1.35
USH2AO75445 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 KRT127P-201ENST00000547183 433 ntBASIC6.6□□□□□ -1.35
USH2AO75445 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
USH2AO75445 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 FLJ38576-201ENST00000623820 2459 ntBASIC6.59□□□□□ -1.35
USH2AO75445 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 AL157823.1-201ENST00000403727 628 ntBASIC6.59□□□□□ -1.35
USH2AO75445 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC6.59□□□□□ -1.35
USH2AO75445 RN7SL288P-201ENST00000490496 291 ntBASIC6.59□□□□□ -1.35
USH2AO75445 AC131206.1-201ENST00000538078 1211 ntBASIC6.59□□□□□ -1.35
USH2AO75445 KNOP1P1-201ENST00000542108 989 ntBASIC6.59□□□□□ -1.35
USH2AO75445 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 MIR4746-201ENST00000579802 71 ntBASIC6.59□□□□□ -1.35
USH2AO75445 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC6.59□□□□□ -1.35
USH2AO75445 AC010531.8-201ENST00000623341 685 ntBASIC6.59□□□□□ -1.35
USH2AO75445 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 MARK2P16-201ENST00000605714 1723 ntBASIC6.59□□□□□ -1.35
USH2AO75445 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC6.59□□□□□ -1.35
USH2AO75445 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 TKT-202ENST00000423516 2075 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC6.59□□□□□ -1.35
USH2AO75445 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC6.59□□□□□ -1.35
USH2AO75445 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 OR2R1P-201ENST00000441404 914 ntBASIC6.59□□□□□ -1.35
USH2AO75445 RN7SL582P-201ENST00000491078 279 ntBASIC6.59□□□□□ -1.35
USH2AO75445 AC003686.1-201ENST00000550956 1034 ntBASIC6.59□□□□□ -1.35
USH2AO75445 HNRNPA1P16-201ENST00000575692 955 ntBASIC6.59□□□□□ -1.35
USH2AO75445 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
USH2AO75445 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms