Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.35□□□□□ -0.11
HCN1O60741 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HCN1O60741 DGCR5-201ENST00000399539 862 ntBASIC14.35□□□□□ -0.11
HCN1O60741 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
HCN1O60741 AL589987.1-201ENST00000453380 819 ntBASIC14.35□□□□□ -0.11
HCN1O60741 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HCN1O60741 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HCN1O60741 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HCN1O60741 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HCN1O60741 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HCN1O60741 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.35□□□□□ -0.11
HCN1O60741 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HCN1O60741 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.35□□□□□ -0.11
HCN1O60741 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
HCN1O60741 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
HCN1O60741 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HCN1O60741 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
HCN1O60741 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.34□□□□□ -0.11
HCN1O60741 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 MYCLP2-201ENST00000449268 967 ntBASIC14.34□□□□□ -0.11
HCN1O60741 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 RN7SL752P-201ENST00000463779 287 ntBASIC14.34□□□□□ -0.11
HCN1O60741 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
HCN1O60741 AC123567.1-201ENST00000548294 1261 ntBASIC14.34□□□□□ -0.11
HCN1O60741 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HCN1O60741 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HCN1O60741 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HCN1O60741 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCN1O60741 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCN1O60741 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCN1O60741 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
HCN1O60741 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCN1O60741 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
HCN1O60741 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCN1O60741 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
HCN1O60741 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
HCN1O60741 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.33□□□□□ -0.11
HCN1O60741 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCN1O60741 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
HCN1O60741 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCN1O60741 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCN1O60741 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.33□□□□□ -0.12
HCN1O60741 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.33□□□□□ -0.12
HCN1O60741 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HCN1O60741 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms