Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.6□□□□□ -0.07
LCMT2O60294 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 LILRP1-201ENST00000444199 1370 ntBASIC14.6□□□□□ -0.07
LCMT2O60294 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 AL137783.1-201ENST00000623494 1896 ntBASIC14.59□□□□□ -0.07
LCMT2O60294 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.59□□□□□ -0.07
LCMT2O60294 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 BAATP1-201ENST00000412284 1225 ntBASIC14.59□□□□□ -0.07
LCMT2O60294 TMEM14DP-201ENST00000422205 345 ntBASIC14.59□□□□□ -0.07
LCMT2O60294 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.59□□□□□ -0.07
LCMT2O60294 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.59□□□□□ -0.07
LCMT2O60294 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 AC007389.4-201ENST00000454674 793 ntBASIC14.59□□□□□ -0.07
LCMT2O60294 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.59□□□□□ -0.07
LCMT2O60294 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 AC009486.1-201ENST00000569860 813 ntBASIC14.59□□□□□ -0.07
LCMT2O60294 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.59□□□□□ -0.07
LCMT2O60294 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.59□□□□□ -0.07
LCMT2O60294 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 AJ011931.1-201ENST00000618749 2492 ntBASIC14.59□□□□□ -0.07
LCMT2O60294 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.59□□□□□ -0.07
LCMT2O60294 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LCMT2O60294 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LCMT2O60294 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCMT2O60294 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCMT2O60294 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LCMT2O60294 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
LCMT2O60294 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCMT2O60294 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCMT2O60294 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.58□□□□□ -0.07
LCMT2O60294 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCMT2O60294 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCMT2O60294 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.58□□□□□ -0.08
LCMT2O60294 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.58□□□□□ -0.08
LCMT2O60294 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.58□□□□□ -0.08
LCMT2O60294 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.58□□□□□ -0.08
LCMT2O60294 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.58□□□□□ -0.08
LCMT2O60294 AC012645.4-201ENST00000610691 1061 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms