Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EXTL3O43909 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.52■□□□□ 0.23
EXTL3O43909 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
EXTL3O43909 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EXTL3O43909 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EXTL3O43909 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EXTL3O43909 AL138709.1-201ENST00000614840 1693 ntBASIC16.52■□□□□ 0.23
EXTL3O43909 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
EXTL3O43909 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.52■□□□□ 0.23
EXTL3O43909 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EXTL3O43909 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
EXTL3O43909 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.51■□□□□ 0.23
EXTL3O43909 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.51■□□□□ 0.23
EXTL3O43909 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.51■□□□□ 0.23
EXTL3O43909 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.51■□□□□ 0.23
EXTL3O43909 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
EXTL3O43909 RAB43P1-201ENST00000561790 589 ntBASIC16.51■□□□□ 0.23
EXTL3O43909 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.51■□□□□ 0.23
EXTL3O43909 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.51■□□□□ 0.23
EXTL3O43909 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
EXTL3O43909 GNRHR2-203ENST00000581100 1187 ntBASIC16.51■□□□□ 0.23
EXTL3O43909 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.51■□□□□ 0.23
EXTL3O43909 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.51■□□□□ 0.23
EXTL3O43909 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 TSPY26P-202ENST00000565928 3884 ntBASIC16.51■□□□□ 0.23
EXTL3O43909 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EXTL3O43909 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EXTL3O43909 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.5■□□□□ 0.23
EXTL3O43909 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.5■□□□□ 0.23
EXTL3O43909 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 AC026434.2-201ENST00000506094 1078 ntBASIC16.5■□□□□ 0.23
EXTL3O43909 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.5■□□□□ 0.23
EXTL3O43909 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.5■□□□□ 0.23
EXTL3O43909 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 AC106886.1-201ENST00000568660 600 ntBASIC16.5■□□□□ 0.23
EXTL3O43909 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.5■□□□□ 0.23
EXTL3O43909 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.5■□□□□ 0.23
EXTL3O43909 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 NORAD-201ENST00000565493 5339 ntBASIC16.5■□□□□ 0.23
EXTL3O43909 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EXTL3O43909 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.5■□□□□ 0.23
EXTL3O43909 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.5■□□□□ 0.23
EXTL3O43909 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms