Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A2O43868 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC28A2O43868 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC28A2O43868 AC091271.1-201ENST00000611877 1162 ntBASIC14.79□□□□□ -0.04
SLC28A2O43868 C18orf15-201ENST00000623680 2534 ntBASIC14.79□□□□□ -0.04
SLC28A2O43868 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A2O43868 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC28A2O43868 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SLC28A2O43868 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC28A2O43868 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SLC28A2O43868 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SLC28A2O43868 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC28A2O43868 FXNP2-201ENST00000411625 547 ntBASIC14.78□□□□□ -0.04
SLC28A2O43868 YBX1P6-201ENST00000442962 1002 ntBASIC14.78□□□□□ -0.04
SLC28A2O43868 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC28A2O43868 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC28A2O43868 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
SLC28A2O43868 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 AC112693.3-201ENST00000624819 1983 ntBASIC14.78□□□□□ -0.04
SLC28A2O43868 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SLC28A2O43868 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC28A2O43868 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC28A2O43868 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC28A2O43868 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SLC28A2O43868 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC28A2O43868 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.77□□□□□ -0.04
SLC28A2O43868 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SLC28A2O43868 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
SLC28A2O43868 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SLC28A2O43868 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC28A2O43868 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC28A2O43868 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SLC28A2O43868 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC28A2O43868 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A2O43868 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A2O43868 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SLC28A2O43868 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A2O43868 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A2O43868 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A2O43868 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SLC28A2O43868 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC28A2O43868 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A2O43868 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC28A2O43868 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A2O43868 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A2O43868 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC28A2O43868 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A2O43868 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC28A2O43868 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A2O43868 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC28A2O43868 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC28A2O43868 U62317.3-201ENST00000608319 855 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms