Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.24■□□□□ 0.03
MID1O15344 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 AL360270.3-201ENST00000609118 1348 ntBASIC15.24■□□□□ 0.03
MID1O15344 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MID1O15344 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 AL023775.1-201ENST00000454907 1746 ntBASIC15.24■□□□□ 0.03
MID1O15344 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MID1O15344 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.24■□□□□ 0.03
MID1O15344 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.24■□□□□ 0.03
MID1O15344 AL391280.1-201ENST00000506969 1062 ntBASIC15.24■□□□□ 0.03
MID1O15344 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
MID1O15344 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.24■□□□□ 0.03
MID1O15344 AC104982.3-201ENST00000581995 514 ntBASIC15.24■□□□□ 0.03
MID1O15344 AC103810.3-201ENST00000583567 96 ntBASIC15.24■□□□□ 0.03
MID1O15344 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.24■□□□□ 0.03
MID1O15344 AL096828.3-201ENST00000615354 462 ntBASIC15.24■□□□□ 0.03
MID1O15344 AL603764.1-201ENST00000636452 321 ntBASIC15.24■□□□□ 0.03
MID1O15344 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MID1O15344 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
MID1O15344 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MID1O15344 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.23■□□□□ 0.03
MID1O15344 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.23■□□□□ 0.03
MID1O15344 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.23■□□□□ 0.03
MID1O15344 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MID1O15344 GHSR-202ENST00000427970 912 ntBASIC15.23■□□□□ 0.03
MID1O15344 AP003171.2-201ENST00000528208 925 ntBASIC15.23■□□□□ 0.03
MID1O15344 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.23■□□□□ 0.03
MID1O15344 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MID1O15344 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 DUX4L47-201ENST00000566374 394 ntBASIC15.23■□□□□ 0.03
MID1O15344 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.23■□□□□ 0.03
MID1O15344 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 RN7SL713P-201ENST00000582127 302 ntBASIC15.23■□□□□ 0.03
MID1O15344 PPY2P-201ENST00000582808 702 ntBASIC15.23■□□□□ 0.03
MID1O15344 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 AC073413.1-201ENST00000603927 732 ntBASIC15.23■□□□□ 0.03
MID1O15344 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.23■□□□□ 0.03
MID1O15344 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 AL008638.5-201ENST00000623814 1298 ntBASIC15.23■□□□□ 0.03
MID1O15344 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.23■□□□□ 0.03
MID1O15344 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 LINC00554-201ENST00000564841 3011 ntBASIC15.23■□□□□ 0.03
MID1O15344 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
MID1O15344 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.23■□□□□ 0.03
MID1O15344 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.23■□□□□ 0.03
MID1O15344 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MID1O15344 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.22■□□□□ 0.03
MID1O15344 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MID1O15344 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms