Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A1O14983 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 AC020914.3-201ENST00000594712 304 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 AC084346.2-201ENST00000607097 949 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 AP001002.3-201ENST00000623482 206 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 AC126755.1-201ENST00000525846 6405 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A1O14983 MST1L-201ENST00000442552 2185 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 AP003680.1-201ENST00000598970 3660 ntBASIC17.37■□□□□ 0.37
ATP2A1O14983 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP2A1O14983 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A1O14983 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ATP2A1O14983 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 AC004945.1-201ENST00000416738 983 ntBASIC17.37■□□□□ 0.37
ATP2A1O14983 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A1O14983 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP2A1O14983 AC100850.1-201ENST00000506768 649 ntBASIC17.37■□□□□ 0.37
ATP2A1O14983 AC007663.3-201ENST00000609632 465 ntBASIC17.37■□□□□ 0.37
ATP2A1O14983 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
ATP2A1O14983 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
ATP2A1O14983 REXO1L4P-201ENST00000605109 1937 ntBASIC17.37■□□□□ 0.37
ATP2A1O14983 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A1O14983 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 AC012508.2-201ENST00000567613 1472 ntBASIC17.37■□□□□ 0.37
ATP2A1O14983 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A1O14983 AL157414.3-201ENST00000624276 1954 ntBASIC17.37■□□□□ 0.37
ATP2A1O14983 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP2A1O14983 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATP2A1O14983 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATP2A1O14983 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.36■□□□□ 0.37
ATP2A1O14983 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.36■□□□□ 0.37
ATP2A1O14983 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP2A1O14983 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATP2A1O14983 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
ATP2A1O14983 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP2A1O14983 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATP2A1O14983 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 PCDHA1-201ENST00000378133 2726 ntBASIC17.36■□□□□ 0.37
ATP2A1O14983 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATP2A1O14983 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
ATP2A1O14983 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A1O14983 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
ATP2A1O14983 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATP2A1O14983 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ATP2A1O14983 CICP6-201ENST00000457191 2729 ntBASIC17.35■□□□□ 0.37
ATP2A1O14983 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP2A1O14983 AL162727.3-201ENST00000635661 2787 ntBASIC17.35■□□□□ 0.37
ATP2A1O14983 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP2A1O14983 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms