Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
O00370 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
O00370 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
O00370 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 WASH3P-207ENST00000560956 1394 ntBASIC16.27■□□□□ 0.2
O00370 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
O00370 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
O00370 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
O00370 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
O00370 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
O00370 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.27■□□□□ 0.2
O00370 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
O00370 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.27■□□□□ 0.2
O00370 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
O00370 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.27■□□□□ 0.2
O00370 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
O00370 ENPP7P5-201ENST00000541031 1031 ntBASIC16.27■□□□□ 0.2
O00370 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 CLUHP6-201ENST00000580789 941 ntBASIC16.27■□□□□ 0.2
O00370 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.27■□□□□ 0.2
O00370 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.27■□□□□ 0.2
O00370 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.27■□□□□ 0.2
O00370 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.27■□□□□ 0.2
O00370 CU634019.7-201ENST00000624153 1185 ntBASIC16.27■□□□□ 0.2
O00370 FP236241.2-201ENST00000624906 1185 ntBASIC16.27■□□□□ 0.2
O00370 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.27■□□□□ 0.2
O00370 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
O00370 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
O00370 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
O00370 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
O00370 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
O00370 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.27■□□□□ 0.19
O00370 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
O00370 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.27■□□□□ 0.19
O00370 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
O00370 AL158070.2-201ENST00000623713 1621 ntBASIC16.27■□□□□ 0.19
O00370 AC007686.3-201ENST00000619017 3487 ntBASIC16.27■□□□□ 0.19
O00370 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
O00370 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
O00370 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.26■□□□□ 0.19
O00370 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.26■□□□□ 0.19
O00370 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
O00370 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.26■□□□□ 0.19
O00370 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
O00370 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
O00370 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.26■□□□□ 0.19
O00370 COX20P2-201ENST00000452636 358 ntBASIC16.26■□□□□ 0.19
O00370 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
O00370 AP001582.1-201ENST00000525856 295 ntBASIC16.26■□□□□ 0.19
O00370 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.26■□□□□ 0.19
O00370 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.26■□□□□ 0.19
O00370 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.26■□□□□ 0.19
O00370 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.26■□□□□ 0.19
O00370 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
O00370 AC007191.1-201ENST00000623179 2995 ntBASIC16.26■□□□□ 0.19
O00370 BX539320.1-201ENST00000623759 877 ntBASIC16.26■□□□□ 0.19
O00370 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms