Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.14■□□□□ 0.33
DDX39AO00148 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
DDX39AO00148 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 AP000845.1-201ENST00000581677 2131 ntBASIC17.14■□□□□ 0.33
DDX39AO00148 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 AC013268.4-201ENST00000637413 2228 ntBASIC17.13■□□□□ 0.33
DDX39AO00148 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
DDX39AO00148 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 REXO1L6P-201ENST00000603433 1515 ntBASIC17.13■□□□□ 0.33
DDX39AO00148 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DDX39AO00148 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 MIR1202-201ENST00000408529 83 ntBASIC17.13■□□□□ 0.33
DDX39AO00148 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
DDX39AO00148 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.13■□□□□ 0.33
DDX39AO00148 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX39AO00148 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.13■□□□□ 0.33
DDX39AO00148 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.13■□□□□ 0.33
DDX39AO00148 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.13■□□□□ 0.33
DDX39AO00148 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.13■□□□□ 0.33
DDX39AO00148 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX39AO00148 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
DDX39AO00148 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 AC091951.1-201ENST00000512854 2465 ntBASIC17.13■□□□□ 0.33
DDX39AO00148 AL360270.3-201ENST00000609118 1348 ntBASIC17.13■□□□□ 0.33
DDX39AO00148 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX39AO00148 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.13■□□□□ 0.33
DDX39AO00148 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DDX39AO00148 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX39AO00148 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX39AO00148 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DDX39AO00148 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX39AO00148 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.12■□□□□ 0.33
DDX39AO00148 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DDX39AO00148 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 AL137783.1-201ENST00000623494 1896 ntBASIC17.12■□□□□ 0.33
DDX39AO00148 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX39AO00148 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.12■□□□□ 0.33
DDX39AO00148 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DDX39AO00148 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX39AO00148 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX39AO00148 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.12■□□□□ 0.33
DDX39AO00148 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.12■□□□□ 0.33
DDX39AO00148 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.12■□□□□ 0.33
DDX39AO00148 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.12■□□□□ 0.33
DDX39AO00148 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.12■□□□□ 0.33
DDX39AO00148 FO681548.1-201ENST00000455617 1132 ntBASIC17.12■□□□□ 0.33
DDX39AO00148 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms