Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 KRT18P32-201ENST00000424695 1287 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 AC005237.2-201ENST00000434368 219 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 TPM4P1-201ENST00000436100 807 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC188H7C350 MTND6P24-201ENST00000440466 518 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 RPL13P2-201ENST00000440687 659 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 AC022447.6-201ENST00000515522 438 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 SLC25A1P1-201ENST00000528351 927 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC188H7C350 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC188H7C350 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 BX640515.1-201ENST00000617215 977 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC188H7C350 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC188H7C350 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 MST1P2-201ENST00000457982 2291 ntBASIC15.89■□□□□ 0.13
CCDC188H7C350 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC188H7C350 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 AC018665.1-201ENST00000622927 1362 ntBASIC15.88■□□□□ 0.13
CCDC188H7C350 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 AL354702.1-201ENST00000442006 1960 ntBASIC15.88■□□□□ 0.13
CCDC188H7C350 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 SERBP1P3-201ENST00000459980 809 ntBASIC15.88■□□□□ 0.13
CCDC188H7C350 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC188H7C350 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC188H7C350 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 AC022145.2-201ENST00000598203 171 ntBASIC15.88■□□□□ 0.13
CCDC188H7C350 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC188H7C350 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 AL360270.3-201ENST00000609118 1348 ntBASIC15.88■□□□□ 0.13
CCDC188H7C350 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC188H7C350 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC188H7C350 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms