Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 CETN4P-206ENST00000642099 2168 ntBASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 SERBP1P3-201ENST00000459980 809 ntBASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 KRT18P43-201ENST00000469825 1281 ntBASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 MIR4469-201ENST00000583919 79 ntBASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 LILRP1-201ENST00000444199 1370 ntBASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM49D1C9J1S8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM49D1C9J1S8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM49D1C9J1S8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRIM49D1C9J1S8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRIM49D1C9J1S8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 AC009093.7-201ENST00000623853 1223 ntBASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM49D1C9J1S8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms