Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 AC244394.1-201ENST00000435000 1665 ntBASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 AP001505.2-201ENST00000616815 443 ntBASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 AC004923.1-202ENST00000642106 209 ntBASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144AA2RUR9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 AC138035.3-201ENST00000622706 2791 ntBASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 FAM58BP-201ENST00000439056 645 ntBASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 AC091812.3-201ENST00000621362 345 ntBASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 Z98259.2-201ENST00000641583 609 ntBASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC144AA2RUR9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 ACTG1P2-201ENST00000415776 1125 ntBASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 ACTG1P11-201ENST00000425411 1125 ntBASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 VDAC1P1-201ENST00000439229 848 ntBASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 KLF2P1-201ENST00000447438 1042 ntBASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 KLK3-207ENST00000595952 969 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 AC090164.2-201ENST00000611487 516 ntBASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms