Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AC012508.2-201ENST00000567613 1472 ntBASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 FO393414.2-201ENST00000405153 598 ntBASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AL590627.1-203ENST00000421194 1026 ntBASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AL353705.2-201ENST00000428243 662 ntBASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AL591424.1-201ENST00000442569 1213 ntBASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AC106730.1-201ENST00000566722 1090 ntBASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.92□□□□□ -0.5
TRAV5A0A0B4J249 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms