Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC138969.3-201ENST00000546612 1459 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC138932.2-201ENST00000548268 1459 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC126755.4-201ENST00000549796 1459 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 RNA5SP421-201ENST00000516864 134 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC004461.2-201ENST00000629517 803 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC005912.2-201ENST00000619492 2400 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AC112693.3-201ENST00000624819 1983 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AL121723.1-201ENST00000445194 1519 ntBASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AC126365.1-201ENST00000578585 1514 ntBASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AC126335.2-201ENST00000623362 4637 ntBASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AC135586.1-201ENST00000539323 574 ntBASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms