Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC22.36■■□□□ 1.17
CDC42BPBQ9Y5S2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 NUDT4P2-201ENST00000578341 546 ntBASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 LINC01815-202ENST00000641468 1409 ntBASIC22.35■■□□□ 1.17
CDC42BPBQ9Y5S2 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 AC087392.5-201ENST00000612517 489 ntBASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 AL118508.1-201ENST00000613502 2345 ntBASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 AC007326.1-201ENST00000604539 458 ntBASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPBQ9Y5S2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 HLA-DQB1-202ENST00000399079 1501 ntBASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 AC092580.1-201ENST00000433998 658 ntBASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CDC42BPBQ9Y5S2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPBQ9Y5S2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms