Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 STK33P1-201ENST00000423835 1218 ntBASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 AC106760.1-201ENST00000508690 800 ntBASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 BTNL10-201ENST00000595971 695 ntBASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 KRT8P35-201ENST00000483942 1338 ntBASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGC4Q9Y5F7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 AC233724.13-201ENST00000598383 410 ntBASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 KRT8P14-201ENST00000414254 1442 ntBASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 AL137783.1-201ENST00000623494 1896 ntBASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 LINC00528-201ENST00000600723 2160 ntBASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms