Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CCL27Q9Y4X3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 AC055811.4-201ENST00000624039 1754 ntBASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL27Q9Y4X3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 AC152010.1-201ENST00000415779 2006 ntBASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 AL139094.1-201ENST00000405549 1188 ntBASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 NUS1P3-201ENST00000423502 862 ntBASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL27Q9Y4X3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms