Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRG3Q9Y2Y8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AL360270.3-201ENST00000609118 1348 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AL365203.3-201ENST00000609742 2057 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 FNTAP2-201ENST00000430308 634 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 CALR4P-201ENST00000431943 946 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AC020914.3-201ENST00000594712 304 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 ZACNP1-201ENST00000612259 710 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AC138466.3-201ENST00000619983 221 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRG3Q9Y2Y8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 AC007326.2-201ENST00000624224 7579 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 POM121L10P-201ENST00000436994 1285 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 IGHJ2P-201ENST00000454480 60 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 AKR7A2P1-201ENST00000460134 915 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 AC091804.1-201ENST00000486888 567 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 SCARNA20.5-201ENST00000516991 142 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 AL451050.2-201ENST00000606967 682 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 AP001002.3-201ENST00000623482 206 ntBASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRG3Q9Y2Y8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms