Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LINC02199-201ENST00000506655 2702 ntBASIC20.41■□□□□ 0.86
PHF8Q9UPP1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 LINC01783-202ENST00000614408 828 ntBASIC20.41■□□□□ 0.86
PHF8Q9UPP1 BX284668.2-205ENST00000619677 828 ntBASIC20.41■□□□□ 0.86
PHF8Q9UPP1 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 OR6D1P-203ENST00000641209 4860 ntBASIC20.41■□□□□ 0.86
PHF8Q9UPP1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF8Q9UPP1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 TLE1P1-201ENST00000422965 589 ntBASIC20.4■□□□□ 0.86
PHF8Q9UPP1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 AC079112.1-201ENST00000454972 939 ntBASIC20.4■□□□□ 0.86
PHF8Q9UPP1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 NDUFS6P1-201ENST00000485187 316 ntBASIC20.4■□□□□ 0.86
PHF8Q9UPP1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 BX088702.1-201ENST00000610784 235 ntBASIC20.4■□□□□ 0.86
PHF8Q9UPP1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.4■□□□□ 0.86
PHF8Q9UPP1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHF8Q9UPP1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHF8Q9UPP1 AC015909.3-201ENST00000572855 1794 ntBASIC20.39■□□□□ 0.86
PHF8Q9UPP1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.39■□□□□ 0.86
PHF8Q9UPP1 LINC01165-201ENST00000445190 1623 ntBASIC20.39■□□□□ 0.86
PHF8Q9UPP1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.39■□□□□ 0.86
PHF8Q9UPP1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 AL592076.1-201ENST00000424448 303 ntBASIC20.39■□□□□ 0.85
PHF8Q9UPP1 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 IGHV3-37-201ENST00000518544 340 ntBASIC20.39■□□□□ 0.85
PHF8Q9UPP1 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PHF8Q9UPP1 AC025271.4-201ENST00000621477 1726 ntBASIC20.39■□□□□ 0.85
PHF8Q9UPP1 CYP2T1P-202ENST00000641596 2535 ntBASIC20.38■□□□□ 0.85
PHF8Q9UPP1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF8Q9UPP1 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms