Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF216Q9NWF9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC005531.1-201ENST00000520729 1360 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 RPL31-202ENST00000409000 641 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 MRPS31P5-202ENST00000423686 920 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 ETF1P1-206ENST00000427296 984 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 HMGN1P5-201ENST00000448591 263 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 RNA5SP421-201ENST00000516864 134 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 RARRES2P8-201ENST00000566335 367 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AL096865.1-201ENST00000606796 927 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC021851.1-201ENST00000608537 1082 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AL359513.1-201ENST00000614364 557 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC091304.6-201ENST00000619761 202 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC017104.5-201ENST00000637647 639 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC092919.2-201ENST00000623631 1645 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 AC092053.1-201ENST00000605787 1936 ntBASIC18.47■□□□□ 0.55
RNF216Q9NWF9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF216Q9NWF9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 MTND4P21-201ENST00000453886 1357 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 TFAMP1-201ENST00000412727 736 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AC092447.2-201ENST00000435487 669 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 CNN2P2-201ENST00000443536 909 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 CNN2P3-201ENST00000450201 906 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 ZNF277-206ENST00000450657 1075 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AC109439.1-201ENST00000511236 715 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 C1DP5-201ENST00000525775 383 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AC107918.2-201ENST00000530817 355 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 SPCS2P1-201ENST00000561636 679 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF216Q9NWF9 AC073333.2-201ENST00000603589 769 ntBASIC18.46■□□□□ 0.55
RNF216Q9NWF9 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms