Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 RPL17P11-201ENST00000417593 544 ntBASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 SNORD3B-2-202ENST00000571722 791 ntBASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AC138696.2-201ENST00000607376 223 ntBASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AL136295.7-201ENST00000619226 1200 ntBASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AC046158.3-201ENST00000624947 2558 ntBASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRMT13Q9NUP7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.58■□□□□ 0.25
TRMT13Q9NUP7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 ISCA2P1-201ENST00000425548 448 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 PDIA3P2-201ENST00000428073 158 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 AC006335.1-201ENST00000445200 547 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CEP164P1-201ENST00000455142 418 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 AC008267.1-201ENST00000474858 1069 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 AC116345.2-201ENST00000512837 523 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 MIR3147-201ENST00000577811 66 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 AC012044.1-201ENST00000603431 297 ntBASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms