Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 AL662844.1-201ENST00000546340 181 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 AL031432.2-201ENST00000566714 459 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 AL928711.1-201ENST00000570165 459 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 MIR3909-201ENST00000579518 119 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 U1.21-201ENST00000580816 167 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 AC015802.1-201ENST00000588104 1449 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 CRYGEP-201ENST00000412192 528 ntBASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 RNA5SP415-201ENST00000517246 115 ntBASIC13.97□□□□□ -0.17
HMG20AQ9NP66 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 AL031055.1-201ENST00000606362 631 ntBASIC13.97□□□□□ -0.17
HMG20AQ9NP66 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMG20AQ9NP66 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 AC130686.1-201ENST00000622936 2466 ntBASIC13.96□□□□□ -0.17
HMG20AQ9NP66 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms