Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 AC022137.2-201ENST00000503482 481 ntBASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 KRT18P25-201ENST00000508931 1278 ntBASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 MIR6805-201ENST00000615055 62 ntBASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 AL645728.2-202ENST00000641679 227 ntBASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF304Q9HCX3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 MSTO2P-201ENST00000314835 1709 ntBASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 AL023775.1-201ENST00000454907 1746 ntBASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF304Q9HCX3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 AC090616.6-203ENST00000579186 1945 ntBASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 MIR658-201ENST00000385210 100 ntBASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.55□□□□□ -0.08
ZNF304Q9HCX3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms