Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 LILRP1-201ENST00000444199 1370 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 TMBIM7P-202ENST00000641474 1516 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 FAM58BP-201ENST00000439056 645 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 RN7SL258P-201ENST00000478664 300 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC026410.1-201ENST00000507366 1101 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 POU5F1P2-201ENST00000521750 823 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 RBM8B-201ENST00000555532 525 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 DNM1P30-201ENST00000563586 452 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 PHBP15-201ENST00000574228 665 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 MIR6769A-201ENST00000617340 73 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AL161773.1-201ENST00000624845 863 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC092299.1-201ENST00000632679 757 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC007292.2-201ENST00000593524 1812 ntBASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP4-1Q9BYQ7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 FAM90A2P-201ENST00000511144 1395 ntBASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 FAM90A25P-201ENST00000528404 1395 ntBASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 IL9RP3-201ENST00000442856 1674 ntBASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 KRT18P36-201ENST00000411618 1276 ntBASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC097065.1-201ENST00000425737 517 ntBASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 AC012362.1-201ENST00000434906 739 ntBASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC7.74□□□□□ -1.17
KRTAP4-1Q9BYQ7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms