Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 LINC01165-201ENST00000445190 1623 ntBASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 AC004837.1-201ENST00000446267 564 ntBASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
CSMD1Q96PZ7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC026470.1-201ENST00000478038 846 ntBASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 CHCHD2P2-201ENST00000503744 321 ntBASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC138466.3-201ENST00000619983 221 ntBASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AL139094.1-201ENST00000405549 1188 ntBASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC026320.2-201ENST00000434379 478 ntBASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 EIF3FP3-201ENST00000434851 1086 ntBASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD1Q96PZ7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms