Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AP002414.2-201ENST00000591780 3365 ntBASIC12.69□□□□□ -0.38
GAFA1Q96PS6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 TNRC18P2-201ENST00000417666 2714 ntBASIC12.68□□□□□ -0.38
GAFA1Q96PS6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 LRRC59-203ENST00000576448 1531 ntBASIC12.68□□□□□ -0.38
GAFA1Q96PS6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 AC134312.5-201ENST00000568031 1313 ntBASIC12.68□□□□□ -0.38
GAFA1Q96PS6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 PKD1P5-201ENST00000532415 10291 ntBASIC12.68□□□□□ -0.38
GAFA1Q96PS6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 TMEM14DP-201ENST00000422205 345 ntBASIC12.68□□□□□ -0.38
GAFA1Q96PS6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
GAFA1Q96PS6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AJ011931.1-201ENST00000618749 2492 ntBASIC12.67□□□□□ -0.38
GAFA1Q96PS6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 KRT17P7-201ENST00000451704 1104 ntBASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AC015936.2-201ENST00000593177 259 ntBASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AC008735.3-201ENST00000596646 500 ntBASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms