Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 REXO1L2P-201ENST00000425429 2069 ntBASIC20.35■□□□□ 0.85
CFAP53Q96M91 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 AC245100.3-201ENST00000441281 285 ntBASIC20.35■□□□□ 0.85
CFAP53Q96M91 AC119751.2-201ENST00000504529 210 ntBASIC20.35■□□□□ 0.85
CFAP53Q96M91 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 AC138951.2-201ENST00000623455 1161 ntBASIC20.35■□□□□ 0.85
CFAP53Q96M91 COX11-210ENST00000639671 696 ntBASIC20.35■□□□□ 0.85
CFAP53Q96M91 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CFAP53Q96M91 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CFAP53Q96M91 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CFAP53Q96M91 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CFAP53Q96M91 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CFAP53Q96M91 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CFAP53Q96M91 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CFAP53Q96M91 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CFAP53Q96M91 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AC079316.1-201ENST00000548397 411 ntBASIC20.34■□□□□ 0.85
CFAP53Q96M91 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CFAP53Q96M91 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.34■□□□□ 0.85
CFAP53Q96M91 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 AC023157.3-201ENST00000619086 2088 ntBASIC20.33■□□□□ 0.85
CFAP53Q96M91 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 AL590640.2-201ENST00000457038 527 ntBASIC20.33■□□□□ 0.85
CFAP53Q96M91 AC026434.2-201ENST00000506094 1078 ntBASIC20.33■□□□□ 0.85
CFAP53Q96M91 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 AC078819.1-201ENST00000547454 765 ntBASIC20.33■□□□□ 0.85
CFAP53Q96M91 AC012085.1-201ENST00000548270 765 ntBASIC20.33■□□□□ 0.85
CFAP53Q96M91 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CFAP53Q96M91 ECM1P1-201ENST00000604092 1279 ntBASIC20.33■□□□□ 0.85
CFAP53Q96M91 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CFAP53Q96M91 AL008721.1-201ENST00000609964 604 ntBASIC20.33■□□□□ 0.85
CFAP53Q96M91 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.33■□□□□ 0.84
CFAP53Q96M91 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.33■□□□□ 0.84
CFAP53Q96M91 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CFAP53Q96M91 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CFAP53Q96M91 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CFAP53Q96M91 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CFAP53Q96M91 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.33■□□□□ 0.84
CFAP53Q96M91 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.33■□□□□ 0.84
CFAP53Q96M91 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CFAP53Q96M91 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CFAP53Q96M91 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CFAP53Q96M91 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CFAP53Q96M91 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CFAP53Q96M91 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CFAP53Q96M91 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms