Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 AC010327.5-201ENST00000586923 3061 ntBASIC13.77□□□□□ -0.21
PTP4A1Q93096 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 LINC01115-203ENST00000606068 577 ntBASIC13.77□□□□□ -0.21
PTP4A1Q93096 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 CETN4P-206ENST00000642099 2168 ntBASIC13.77□□□□□ -0.21
PTP4A1Q93096 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 AL121723.1-201ENST00000445194 1519 ntBASIC13.76□□□□□ -0.21
PTP4A1Q93096 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 FAM86GP-201ENST00000448322 971 ntBASIC13.76□□□□□ -0.21
PTP4A1Q93096 KLF2P3-201ENST00000451977 1087 ntBASIC13.76□□□□□ -0.21
PTP4A1Q93096 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.76□□□□□ -0.21
PTP4A1Q93096 AC093028.1-201ENST00000622998 982 ntBASIC13.76□□□□□ -0.21
PTP4A1Q93096 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PTP4A1Q93096 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTP4A1Q93096 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PTP4A1Q93096 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTP4A1Q93096 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms