Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHKBP1Q8TBC3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AC127383.1-201ENST00000444697 1800 ntBASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 TPM3P8-201ENST00000330554 643 ntBASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 HOMER2P2-201ENST00000451621 847 ntBASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AL591846.1-201ENST00000451736 433 ntBASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AC104306.2-201ENST00000451877 341 ntBASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AC004066.1-201ENST00000502488 802 ntBASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SHKBP1Q8TBC3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 LRRC59-203ENST00000576448 1531 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AL009178.2-201ENST00000597278 2719 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 BTBD6P1-201ENST00000412176 1267 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AL022328.3-201ENST00000607943 679 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AC005695.3-201ENST00000614522 232 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AL139099.5-201ENST00000635274 300 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AC023908.3-201ENST00000564211 3047 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AL158070.2-201ENST00000623713 1621 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 FER1L4-210ENST00000615531 5998 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms