Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL22A1Q8NFW1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL22A1Q8NFW1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL22A1Q8NFW1 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.64■□□□□ 0.74
COL22A1Q8NFW1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
COL22A1Q8NFW1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL22A1Q8NFW1 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 AC006372.4-201ENST00000624122 1543 ntBASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 AF274858.1-201ENST00000406288 372 ntBASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 HLA-DPA2-205ENST00000433582 733 ntBASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 MBP-238ENST00000580402 915 ntTSL 5 BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL22A1Q8NFW1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AP002353.1-201ENST00000528257 1599 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 RNVU1-8-201ENST00000364272 125 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 GEMIN8P4-201ENST00000380526 729 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC098934.1-203ENST00000442868 1262 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC092862.1-201ENST00000541534 533 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC124068.2-201ENST00000569473 1109 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC004686.1-201ENST00000605113 538 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 AC092127.1-201ENST00000567093 3455 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL22A1Q8NFW1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 PPP1R2P4-201ENST00000424051 595 ntBASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 LINC00244-201ENST00000625073 613 ntBASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 AC009093.10-201ENST00000641956 1442 ntBASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC19.62■□□□□ 0.73
COL22A1Q8NFW1 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms