Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC087481.3-201ENST00000602886 1894 ntBASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC084346.2-201ENST00000607097 949 ntBASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC155Q8N6L0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC155Q8N6L0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 TNRC18P2-201ENST00000417666 2714 ntBASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AC093433.1-201ENST00000458048 571 ntBASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 KRT90P-201ENST00000549264 1064 ntBASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AC093813.1-201ENST00000605066 256 ntBASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AC244093.1-201ENST00000610837 814 ntBASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AC005252.2-201ENST00000624630 1141 ntBASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC155Q8N6L0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 AC091951.1-201ENST00000512854 2465 ntBASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC155Q8N6L0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms