Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 PGAM1P5-201ENST00000548011 764 ntBASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 AL031713.1-201ENST00000564813 661 ntBASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL27A1Q8IZC6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AP003680.1-201ENST00000598970 3660 ntBASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AC003686.1-201ENST00000550956 1034 ntBASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 MIR6858-201ENST00000620733 67 ntBASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AC092580.1-201ENST00000433998 658 ntBASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 SIGLEC18P-201ENST00000602271 909 ntBASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 AL161773.1-201ENST00000624845 863 ntBASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL27A1Q8IZC6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 PCDHA1-201ENST00000378133 2726 ntBASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 AC114947.1-202ENST00000514136 344 ntBASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms