Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 AC114812.1-204ENST00000449669 728 ntBASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 TDH-203ENST00000531764 1110 ntBASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 AP005019.2-201ENST00000615104 511 ntBASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 IGHV3-72-202ENST00000621503 303 ntBASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCUBE3Q8IX30 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 TNRC18P2-201ENST00000417666 2714 ntBASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 RNU1-114P-201ENST00000365297 166 ntBASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 HLA-K-203ENST00000430151 1046 ntBASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 AL390728.6-201ENST00000566446 1246 ntBASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 AC009486.1-201ENST00000569860 813 ntBASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCUBE3Q8IX30 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCUBE3Q8IX30 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms