Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 AL023775.1-201ENST00000454907 1746 ntBASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 CICP6-201ENST00000457191 2729 ntBASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 RPSAP36-202ENST00000494591 1261 ntBASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 FTLP10-202ENST00000505798 471 ntBASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 PPY2P-201ENST00000582808 702 ntBASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 AC091271.1-201ENST00000611877 1162 ntBASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC60Q8IWA6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 AC013268.4-201ENST00000637413 2228 ntBASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC60Q8IWA6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 INE2-201ENST00000630399 1874 ntBASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC60Q8IWA6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms