Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 AC012441.2-201ENST00000444843 739 ntBASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 AL353637.1-201ENST00000451571 732 ntBASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 AL160314.3-201ENST00000556041 767 ntBASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 AL118508.1-201ENST00000613502 2345 ntBASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 AC234782.1-201ENST00000451950 919 ntBASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 AC020922.3-201ENST00000595064 547 ntBASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 MIR6727-201ENST00000620702 65 ntBASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 NAP1L6-202ENST00000641404 1222 ntBASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS4Q8IUM7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 ISCA2P1-201ENST00000425548 448 ntBASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 VDAC1P1-201ENST00000439229 848 ntBASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 HLA-J-204ENST00000495278 958 ntBASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 RCC2P8-201ENST00000502779 1035 ntBASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AC090857.1-201ENST00000527400 390 ntBASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AC009779.1-201ENST00000551138 283 ntBASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 AC008805.1-201ENST00000590892 364 ntBASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms