Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 SBF1P1-201ENST00000444527 5631 ntBASIC14.11□□□□□ -0.15
ZNF550Q7Z398 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 AP000845.1-201ENST00000581677 2131 ntBASIC14.11□□□□□ -0.15
ZNF550Q7Z398 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 SPDYE19P-201ENST00000338590 713 ntBASIC14.11□□□□□ -0.15
ZNF550Q7Z398 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 GAPDHP21-201ENST00000450301 1010 ntBASIC14.11□□□□□ -0.15
ZNF550Q7Z398 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 AL596325.1-201ENST00000563991 1082 ntBASIC14.11□□□□□ -0.15
ZNF550Q7Z398 AC036164.1-201ENST00000570544 333 ntBASIC14.11□□□□□ -0.15
ZNF550Q7Z398 SAMD11P1-201ENST00000571429 661 ntBASIC14.11□□□□□ -0.15
ZNF550Q7Z398 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF550Q7Z398 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 REXO1L4P-201ENST00000605109 1937 ntBASIC14.1□□□□□ -0.15
ZNF550Q7Z398 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 AC244107.1-201ENST00000442033 332 ntBASIC14.1□□□□□ -0.15
ZNF550Q7Z398 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 AC004790.1-201ENST00000612686 536 ntBASIC14.1□□□□□ -0.15
ZNF550Q7Z398 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF550Q7Z398 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms