Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 AC026803.1-201ENST00000569130 274 ntBASIC19.99■□□□□ 0.79
USP31Q70CQ4 RN7SL555P-201ENST00000584742 339 ntBASIC19.99■□□□□ 0.79
USP31Q70CQ4 AC073352.2-201ENST00000609385 439 ntBASIC19.99■□□□□ 0.79
USP31Q70CQ4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
USP31Q70CQ4 AC013726.1-201ENST00000563747 2285 ntBASIC19.99■□□□□ 0.79
USP31Q70CQ4 TBC1D3J-201ENST00000620719 1426 ntBASIC19.99■□□□□ 0.79
USP31Q70CQ4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP31Q70CQ4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 AC007950.2-201ENST00000615045 2347 ntBASIC19.98■□□□□ 0.79
USP31Q70CQ4 OR2K2-202ENST00000374428 1038 ntBASIC19.98■□□□□ 0.79
USP31Q70CQ4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 AC008267.1-201ENST00000474858 1069 ntBASIC19.98■□□□□ 0.79
USP31Q70CQ4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 POU5F1P2-201ENST00000521750 823 ntBASIC19.98■□□□□ 0.79
USP31Q70CQ4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 YRDCP1-201ENST00000621419 643 ntBASIC19.98■□□□□ 0.79
USP31Q70CQ4 AC051619.9-201ENST00000623237 597 ntBASIC19.98■□□□□ 0.79
USP31Q70CQ4 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
USP31Q70CQ4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP31Q70CQ4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 RPL17P11-201ENST00000417593 544 ntBASIC19.97■□□□□ 0.79
USP31Q70CQ4 FGFR3P1-201ENST00000449999 601 ntBASIC19.97■□□□□ 0.79
USP31Q70CQ4 LDHBP1-201ENST00000455730 1119 ntBASIC19.97■□□□□ 0.79
USP31Q70CQ4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 MIR3677-201ENST00000578964 60 ntBASIC19.97■□□□□ 0.79
USP31Q70CQ4 MIR6727-201ENST00000620702 65 ntBASIC19.97■□□□□ 0.79
USP31Q70CQ4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP31Q70CQ4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 KRT8P28-201ENST00000433288 1390 ntBASIC19.97■□□□□ 0.79
USP31Q70CQ4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
USP31Q70CQ4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP31Q70CQ4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms