Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AC021097.1-201ENST00000607902 574 ntBASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AL645939.2-201ENST00000427340 991 ntBASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AC091812.2-201ENST00000619081 385 ntBASIC13.44□□□□□ -0.26
C11orf88Q6PI97 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.44□□□□□ -0.26
C11orf88Q6PI97 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms