Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA8Q53HL2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 HOMER2P2-201ENST00000451621 847 ntBASIC20.91■□□□□ 0.94
CDCA8Q53HL2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AL391280.1-201ENST00000506969 1062 ntBASIC20.91■□□□□ 0.94
CDCA8Q53HL2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AC126177.1-201ENST00000547829 2218 ntBASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 AC138696.2-201ENST00000607376 223 ntBASIC20.91■□□□□ 0.94
CDCA8Q53HL2 ZACNP1-201ENST00000612259 710 ntBASIC20.91■□□□□ 0.94
CDCA8Q53HL2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.91■□□□□ 0.94
CDCA8Q53HL2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 AC023157.3-201ENST00000619086 2088 ntBASIC20.9■□□□□ 0.94
CDCA8Q53HL2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 FKBP4P6-201ENST00000457486 1332 ntBASIC20.9■□□□□ 0.94
CDCA8Q53HL2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC20.9■□□□□ 0.94
CDCA8Q53HL2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.89■□□□□ 0.94
CDCA8Q53HL2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms