Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC007969.1-201ENST00000433675 447 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 Z93015.1-201ENST00000451718 390 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC055811.4-201ENST00000624039 1754 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 FGD5P1-202ENST00000614866 2498 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC023090.2-201ENST00000625182 2110 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 MIR1202-201ENST00000408529 83 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 GPAA1P2-201ENST00000417923 928 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 CNN2P10-201ENST00000443067 918 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 EEF1DP1-201ENST00000585891 896 ntBASIC18.3■□□□□ 0.52
RFX7Q2KHR2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX7Q2KHR2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 AC103702.1-201ENST00000548801 2630 ntBASIC18.29■□□□□ 0.52
RFX7Q2KHR2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 LRRC59-203ENST00000576448 1531 ntBASIC18.29■□□□□ 0.52
RFX7Q2KHR2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 PFN1P12-201ENST00000455938 534 ntBASIC18.29■□□□□ 0.52
RFX7Q2KHR2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 MIR4741-201ENST00000579822 90 ntBASIC18.29■□□□□ 0.52
RFX7Q2KHR2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX7Q2KHR2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX7Q2KHR2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms