Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H1AQ02539 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AC006504.5-208ENST00000588784 2401 ntBASIC11.79□□□□□ -0.52
HIST1H1AQ02539 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 FAM58DP-201ENST00000428076 619 ntBASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AP000344.2-201ENST00000512987 629 ntBASIC11.79□□□□□ -0.52
HIST1H1AQ02539 HNRNPUP1-201ENST00000554987 333 ntBASIC11.79□□□□□ -0.52
HIST1H1AQ02539 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 MIR6080-201ENST00000617359 66 ntBASIC11.79□□□□□ -0.52
HIST1H1AQ02539 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.79□□□□□ -0.52
HIST1H1AQ02539 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
HIST1H1AQ02539 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms