Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDK5Q00535 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDK5Q00535 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.8□□□□□ -0.2
CDK5Q00535 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 AL354702.1-201ENST00000442006 1960 ntBASIC13.8□□□□□ -0.2
CDK5Q00535 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.79□□□□□ -0.2
CDK5Q00535 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 RPL37AP1-201ENST00000412502 279 ntBASIC13.79□□□□□ -0.2
CDK5Q00535 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CDK5Q00535 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.79□□□□□ -0.2
CDK5Q00535 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 KRT18P58-201ENST00000527480 1120 ntBASIC13.79□□□□□ -0.2
CDK5Q00535 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 AC000095.1-201ENST00000603208 874 ntBASIC13.79□□□□□ -0.2
CDK5Q00535 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 AC009093.7-201ENST00000623853 1223 ntBASIC13.79□□□□□ -0.2
CDK5Q00535 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.79□□□□□ -0.2
CDK5Q00535 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 AC018665.1-201ENST00000622927 1362 ntBASIC13.79□□□□□ -0.2
CDK5Q00535 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDK5Q00535 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.79□□□□□ -0.2
CDK5Q00535 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CDK5Q00535 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 OR2I1P-209ENST00000641730 5365 ntBASIC13.78□□□□□ -0.2
CDK5Q00535 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDK5Q00535 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDK5Q00535 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.78□□□□□ -0.2
CDK5Q00535 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 YBX1P5-201ENST00000509441 847 ntBASIC13.78□□□□□ -0.2
CDK5Q00535 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.78□□□□□ -0.2
CDK5Q00535 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDK5Q00535 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.78□□□□□ -0.2
CDK5Q00535 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDK5Q00535 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms